Graph Layout II

From CS294-10 Visualization Sp11

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Lecture on April 13, 2011




Same readings as last time. Read something you didn't read for Monday's class. You should still make a new comment for this lecture

  • Graph Visualization and Navigation in Information Visualization: A Survey. Ivan Herman, Guy Melancon, M. Scott Marshall. IEEE Transactions on Visualization and Computer Graphics, 2000. Just skim this one.(pdf)
  • Hierarchical Edge Bundles: Visualization of Adjacency Relations in Hierarchical Data. Danny Holten. InfoVis 2006. (pdf)
  • Improving Walker's Algorithm to Run in Linear Time. Buchheim, Jünger, and Leipert. Graph Drawing 2002. (pdf)

Optional Readings

  • Dig-cola: Directed graph layout through constrained energy minimization. Tim Dwyer and Yehuda Koren. IEEE InfoVis 2005. (pdf) [Note: This won the best paper award at InfoVis 05.]
  • Vizster: Visualizing Online Social Networks. Jeffrey Heer, danah boyd. InfoVis 2005. (pdf)
  • Visual Exploration of Multivariate Graphs. M. Wattenberg. CHI 2006. (pdf)
  • A Technique for Drawing Directed Graphs. Gansner, Koutsofios, North, Vo. 1993. (pdf) [Note: This covers the DOT algorithm, used by the popular GraphViz package]

Demonstrations / Examples


Michael Porath - Apr 13, 2011 03:58:32 pm

Eyebeam, Google, and GAFFTA organized a visualization challenge that has caused some buzz in my twitter stream. The challenge is about visualizing recent budget and tax data. Many visualizations took a different approach to the tree that is the breakdown in budget figures. Some examples use tree maps, others use spanning trees or stream graphs. I personally found to be an effective visualization because it dedicates most screen real estate to the figures you're looking at.

Make sure to visit "all entries", not the finalists visualization. The jury didn't necessarily choose the most effective visualizations.

Julian Limon - Apr 13, 2011 05:49:46 pm

I agree with was said in class today about Treemaps. I find them unintuitive and confusing in most cases. It's not that I think they aren't useful--I believe that they may convey a general overview in cases where fast decisions must be made (such as the stock market example and the case that Michael Cohen mentioned in class). However, in many cases they are created without justification. They certainly look more impressive than a bar chart, but that doesn't make them more effective.

On a different note, I was intrigued by the concept of degree-of-interest trees. They might be useful for a number of situations where there is a tradeoff between details and context. Trying to infer what the right interest is may be difficult, though. Even if the system learns from the most common cases, the default visualizations may prime the user to a certain analysis. If the user doesn't go ahead and discover her own path, she might miss the opportunity to discover some other interesting aspects of the data.

Michael Hsueh - Apr 14, 2011 12:35:35 am

Vizster is a neat system that visualizes social network graphs. One thing I've noticed about several of the graph visualization tools we've seen so far in the class is that they frequently use physical analogies to model how to visualize things. For example, in the Vizster system, the concept of a spring is used to model how far nodes and clusters should stay from each other. The analogy does not stop there as the spring model is also useful in interaction. The Vizster system simulates nodes returning back to their positions, with the system "bobbing" and contracting back into equilibrium, just as a network of springs would. The Holten paper talks about splines that are organized into bundles that can be splayed out. Our physical world knowledge of bundles of wires carries over into the more abstract domain of visualizations. Specifically, our knowledge of real world bundles translate conceptually into how we understand relationships between the elements depicted in the visualizations (e.g., wires connect individual components, while bundles of wires connect higher level devices). Physical world analogies seem to work effectively in the context of graph visualization.

Overall, I really like the Vizster system. It seems very well designed. Something that would have been cool is if there was a way to recursively find clusters within clusters.

Saung Li - Apr 14, 2011 06:30:46 pm

With the explosion of social networking services, systems like Vizster can help us study the large amount of data that has arisen from these services. I would like to see Vizster integrated with a site like Facebook so that people can explore how they are related to others. I find the X-ray mode to be a pretty cool way to see the attributes of others; it colors in the names of people and the actual color correlates to the value of the attribute. I disagree with the colors chosen though, as the black background and bright colors create an unpleasant sight. The Herman paper raises a good point on how zooming and panning can make the user lose context. When exploring a road network, for example, a user might have to keep zooming in and out and panning to look at different places and keep track of where he currently is observing. One of the focus and context techniques is the fisheye distortion, where part of the grid can be blown up. This is an interesting way to deal with the problem of losing context, but it may just look weird.

Matthew Can - Apr 15, 2011 05:06:51 am

I was fascinated by the exotic visualizations produced by Holten's hierarchical edge bundling. The method not only reduces visual clutter but also highlights the connectedness of nodes in the hierarchy graph through the bundling of adjacency edges between their children. I think it would be interesting to explore ways that interaction can enhance this visualization. The paper mentions this somewhat, but I think it deserves greater emphasis. For example, the brushing technique could be extended to support multiple selections, assigning different colors to each one. This would help resolve the ambiguity problem when several bundles overlap.

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